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started basillab documentation

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\begin{thebibliography}{10}
\providecommand{\noopsort}[1]{}
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\href{https://www.ncbi.nlm.nih.gov/pubmed/#1}{#1}}
\addcontentsline{toc}{chapter}{\protect\numberline{\color{white}}{\refname}}
\bibitem{Ceelen2008}
K.K. Ceelen, A.~Stekelenburg, S.~Loerakker, G.J. Strijkers, D.L. Bader,
K.~Nicolay, F.P.T. Baaijens and C.W.J. Oomens.
\newblock {C}ompression-induced damage and internal tissue strains are related.
\newblock \emph{Journal of Biomechanics}, \textbf{41}(16):3399--3404, December
2008.
\newblock \pmid{19010470}.
\newblock \doi{10.1016/j.jbiomech.2008.09.016}.
\bibitem{Loerakker2011a}
S.~Loerakker, E.~Manders, G.J. Strijkers, K.~Nicolay, F.P.T. Baaijens, D.L.
Bader and C.W.J. Oomens.
\newblock {T}he effects of deformation, ischemia, and reperfusion on the
development of muscle damage during prolonged loading.
\newblock \emph{Journal of Applied Physiology}, \textbf{111}(4):1168--1177,
October 2011.
\newblock \pmid{21757578}.
\newblock \doi{10.1152/japplphysiol.00389.2011}.
\bibitem{Loerakker2011}
S.~Loerakker, C.W.J. Oomens, E.~Manders, T.~Schakel, D.L. Bader, F.P.T.
Baaijens, K.~Nicolay and G.J. Strijkers.
\newblock {I}schemia-reperfusion injury in rat skeletal muscle assessed with
{T}2-weighted and dynamic contrast-enhanced {MRI}.
\newblock \emph{Magnetic Resonance In Medicine}, \textbf{66}(2):528--537,
August 2011.
\newblock \pmid{21360588}.
\newblock \doi{10.1002/mrm.22801}.
\bibitem{Loerakker2010}
S.~Loerakker, A.~Stekelenburg, G.J. Strijkers, J.J.M. Rijpkema, F.P.T.
Baaijens, D.L. Bader, K.~Nicolay and C.W.J. Oomens.
\newblock {T}emporal effects of mechanical loading on deformation-induced
damage in skeletal muscle tissue.
\newblock \emph{Annals of Biomedical Engineering}, \textbf{38}(8):2577--2587,
August 2010.
\newblock \pmid{20232152}.
\newblock \doi{10.1007/s10439-010-0002-x}.
\bibitem{Moerman2013}
Kevin~M. Moerman, Aart~J. Nederveen and Ciaran~K. Simms.
\newblock {I}mage based model construction, boundary condition specification
and inverse {FEA} control: a basic {M}atlab toolkit for {FEB}io.
\newblock In: \emph{Proceedings of the 11th International Symposium on Computer
Methods in Biomechanics and Biomedical Engineering}. Salt Lake City, Utah,
USA, April 2013.
\bibitem{Nierop2010}
Bastiaan~J. \noopsort{Nierop}van Nierop, Anke Stekelenburg, Sandra Loerakker,
Cees~W. Oomens, Dan Bader, Gustav~J. Strijkers and Klaas Nicolay.
\newblock {D}iffusion of water in skeletal muscle tissue is not influenced by
compression in a rat model of deep tissue injury.
\newblock \emph{Journal of Biomechanics}, \textbf{43}(3):570--575, February
2010.
\newblock \pmid{19897200}.
\newblock \doi{10.1016/j.jbiomech.2009.07.043}.
\bibitem{Oomens2010}
C.W.J. Oomens, Sandra Loerakker and D.L. Bader.
\newblock {T}he importance of internal strain as opposed to interface pressure
in the prevention of pressure related deep tissue injury.
\newblock \emph{Journal of tissue viability}, \textbf{19}(2):35--42, May 2010.
\newblock \pmid{20005716}.
\newblock \doi{10.1016/j.jtv.2009.11.002}.
\bibitem{Stekelenburg2006}
A.~Stekelenburg, C.W.J. Oomens, G.J. Strijkers, L.~\noopsort{Graaf}de Graaf,
D.L. Bader and K.~Nicolay.
\newblock {A} new {MR}-compatible loading device to study in vivo muscle damage
development in rats due to compressive loading.
\newblock \emph{Medical Engineering and Physics}, \textbf{28}(4):331--338, May
2006.
\newblock \pmid{16118060}.
\newblock \doi{10.1016/j.medengphy.2005.07.005}.
\bibitem{Stekelenburg2006a}
A.~Stekelenburg, C.W.J. Oomens, G.J. Strijkers, K.~Nicolay and D.L. Bader.
\newblock {C}ompression-induced deep tissue injury examined with magnetic
resonance imaging and histology.
\newblock \emph{Journal of Applied Physiology}, \textbf{100}(6):1946--1954,
June 2006.
\newblock \pmid{16484364}.
\newblock \doi{10.1152/japplphysiol.00889.2005}.
\bibitem{Stekelenburg2007}
Anke Stekelenburg, Gustav~J. Strijkers, Henry Parusel, Dan~L. Bader, Klaas
Nicolay and Cees~W. Oomens.
\newblock {R}ole of ischemia and deformation in the onset of
compression-induced deep tissue injury: {MRI}-based studies in a rat model.
\newblock \emph{Journal of Applied Physiology}, \textbf{102}(5):2002--2011, May
2007.
\newblock \pmid{17255369}.
\newblock \doi{10.1152/japplphysiol.01115.2006}.
\bibitem{Traa2015}
W.A. Traa, D.L. Bader and C.W.J. Oomens.
\newblock \href{http://repository.tue.nl/posters/801419.pdf}{Non-invasive
monitoring of pressure ulcer formation.}
\newblock Annual MaTe Poster Award of the Materials Technology (MaTe) group
(Eindhoven University of Technology, Eindhoven, The Netherlands), December
2015.
\bibitem{Traa2014}
W.A. Traa, J.L. Nelissen, K.M. Moerman, F.P.T. Baaijens, D.L. Bader and C.W.J.
Oomens.
\newblock \href{http://repository.tue.nl/posters/783267.pdf}{Investigating deep
tissue injury with MRI based 3D FEA.}
\newblock Annual MaTe Poster Award of the Materials Technology (MaTe) group
(Eindhoven University of Technology, Eindhoven, The Netherlands), December
2014.
\end{thebibliography}
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\hypersetup{colorlinks=true, backref=false, pdfauthor={Mark C. van Turnhout}, pdftitle={BasilLab User Manual}, pdfsubject={BasilLab User Manual}, pdfstartview=FitW, pdfkeywords={Basil the Rat, Matlab, Python, Abaqus}}
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