Commit 535df924 authored by Turnhout, M.C. van's avatar Turnhout, M.C. van
Browse files

Merge branch 'doc' of gitlab.tue.nl:STEM/TFlab

parents 19d128d6 af71029e
......@@ -93,7 +93,7 @@ The benefit of this method is the larger freedom of geometries and meshes. You c
This method requires \texttt{param.buildFEM $\neq$ 'matlab'} and uses \TF{buildFEM} to write the python file that is fed to Abaqus so that Abaqus can write input file (so that \TF{runFEM} can feed the input file to Abaqus).\\
\noindent Note that this method depends on \texttt{aba\_readmesh.m} from \href{http://mategit.wfw.wtb.tue.nl/STEM/abalab}{abalab} for parsing of the input file for the mesh and the node sets. \warning
\noindent Note that this method depends on \texttt{aba\_readmesh.m} from \href{https://gitlab.tue.nl/STEM/abalab}{abalab} for parsing of the input file for the mesh and the node sets. \warning
\section{Parameters}
......@@ -187,7 +187,7 @@ file & description & source \\ \noalign{\smallskip}\hline\noalign{\smallskip}
\texttt{<expname>\_film$i$\_frame$j$.odb} & The Abaqus Output DataBase, contains the results of the simulation in binary (Abaqus) format for frame $j$ of film $i$. Can be opened and read with Abaqus cae or Abaqus viewer. & Abaqus \\
\texttt{<expname>\_film$i$\_frame$j$.dat} & text file that contains the results of Abaqus' parsing of the input file for frame $j$ of film $i$. When something is wrong with your input file, the \texttt{dat}-file tells you what it is. & Abaqus \\
\texttt{<expname>\_film$i$\_frame$j$.msg} & text file that contains Abaqus messages during the simulation for frame $j$ of film $i$. When your simulation fails, the \texttt{msg}-file may tell you what the reason is. & Abaqus \\
\texttt{<expname>\_film$i$\_frame$j$.sta} & text file that contains the progress of the simulation for frame $j$ of film $i$. You can monitor this file to see how well your simulations runs, converges.\\\noalign{\smallskip}\hline
\texttt{<expname>\_film$i$\_frame$j$.sta} & text file that contains the progress of the simulation for frame $j$ of film $i$. You can monitor this file to see how well your simulations runs, converges.& Abaqus\\\noalign{\smallskip}\hline
\end{tabularx}
\end{table}
......@@ -207,7 +207,7 @@ file & description & deleted? \\ \noalign{\smallskip}\hline\noalign{\smallskip}
\texttt{<expname>\_film$i$\_frame$j$.1.SMAFocus} & binary file & yes\\
\texttt{<expname>\_film$i$\_frame$j$.023} & binary file & yes\\
\texttt{<expname>\_film$i$\_frame$j$.cid} & text file, contains the name of your computer and some numbers & yes\\
\texttt{<expname>\_film$i$\_frame$j$.lck} & 'lock'-file that tells Abaqus that that job is already running. & yes\\
\texttt{<expname>\_film$i$\_frame$j$.lck} & `lock'-file that tells Abaqus that that job is already running. & yes\\
\texttt{<expname>\_film$i$\_frame$j$.mdl} & binary file& yes\\
\texttt{<expname>\_film$i$\_frame$j$.prt} & a text file with plenty numbers & no\\
\texttt{<expname>\_film$i$\_frame$j$.sst} & binary file & yes\\
......
......@@ -62,7 +62,7 @@ labdef.FEMbuild = 'python';
%%%%%%%%%%%%%%%%%%%%%%% do not edit below this line %%%%%%%%%%%%%%%%%%%%%%%
% written by TF_labconfig: http://mategit.wfw.wtb.tue.nl/STEM/TFlab
% written by TF_labconfig: https://gitlab.tue.nl/STEM/TFlab
% @ 13-Oct-2018 11:53:14
end
\end{lstlisting}
......@@ -229,7 +229,7 @@ labdef.simfailtol = 5;
labdef.fancyest = 0.500000;
labdef.instpath = '/home/mark/git/TFlab/';
labdef.intvars = {'refframe', 'nfilm', 'nframe', 'stack', 'curlcheck', 'simfailtol', 'maxinc', 'nelx', 'nely', 'nelz', 'nCPU', 'submit'};
labdef.TFlabUrl = 'http://mategit.wfw.wtb.tue.nl/STEM/TFlab';
labdef.TFlabUrl = 'https://gitlab.tue.nl/STEM/TFlab';
labdef.TFlabBranch = 'testing';
labdef.TFlabVersion = '0.1+';
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
......@@ -284,7 +284,7 @@ labdef.simfailtol = 5;
labdef.fancyest = 0.500000;
labdef.instpath = '/home/mark/git/mylab/matlab/TFlab/';
labdef.intvars = {'refframe', 'nfilm', 'nframe', 'stack', 'curlcheck', 'simfailtol', 'maxinc', 'nelx', 'nely', 'nelz', 'nCPU', 'submit'};
labdef.TFlabUrl = 'http://mategit.wfw.wtb.tue.nl/STEM/TFlab';
labdef.TFlabUrl = 'https://gitlab.tue.nl/STEM/TFlab';
labdef.TFlabBranch = 'testing';
labdef.TFlabVersion = '0.1+';
labdef.test = 1.000000;
......
......@@ -60,6 +60,15 @@
url = {https://fivethirtyeight.com/features/science-isnt-broken/#part2},
}
@Misc{Regier2016,
author = {Regier, Ryan},
title = {{C}ounting {E}lsevier {P}ublications {I}ndexed in {S}copus},
month = {April},
year = {2016},
note = {\href{https://awayofhappening.wordpress.com/2016/04/28/counting-elsevier-publications-indexed-in-scopus/}{https://awayofhappening.wordpress.com/2016/04/28/counting-elsevier-publications-indexed-in-scopus/}},
url = {https://awayofhappening.wordpress.com/2016/04/28/counting-elsevier-publications-indexed-in-scopus/},
}
@InCollection{Wonder1973,
author = {Wonder, Stevie},
title = {Don't You Worry 'bout a Thing},
......@@ -107,11 +116,11 @@
organization = {Soft Tissue Engineering \& Mechanobiology (STEM) Group, Department of Biomedical Engineering, Eindhoven University of Technology},
address = {Eindhoven, The Netherlands},
year = {2018},
note = {\href{https://bitbucket.org/matecellab/fiblab}{https://bitbucket.org/matecellab/fiblab}},
note = {\href{https://gitlab.tue.nl/STEM/fiblab}{https://gitlab.tue.nl/STEM/fiblab}},
abstract = {On the Intricacies and Difficulties of Data with Angles and Orientations, and of Our Thoughts and Musings Thereupon, with Proposals and Aids for Dealing with Such, and Containing Various Plates and Figures, All As a Service to the Diligent Researcher and Troubled Reader},
owner = {tue},
timestamp = {2018.05.10},
url = {https://bitbucket.org/matecellab/fiblab},
url = {https://gitlab.tue.nl/STEM/fiblab},
}
@InCollection{Adams1996,
......@@ -174,7 +183,7 @@
}
@Article{Haaften2019,
author = {\noopsort{Haaften}van Haaften, Eline E. and \noopsort{Turnhout}van Turnhout, Mark C. and Kurnianwan, Nicholas A.},
author = {\noopsort{Haaften}van Haaften, Eline E. and \noopsort{Turnhout}van Turnhout, Mark C. and Kurniawan, Nicholas A.},
title = {{I}mage-based analysis of uniaxial ring test for mechanical characterization of soft materials and biological tissues},
journal = {Soft Matter},
year = {2019},
......
......@@ -68,7 +68,7 @@
\usepackage{makeidx}
\newcommand\TF[1]{\texttt{TF\_#1.m}\index{TF_\#1.m@\texttt{TF\_#1.m}}}
\newcommand\param[1]{\texttt{param.#1}\index{param.\#1@\texttt{param.#1}}}
\newcommand\fiblab{\href{https://bitbucket.org/matecellab/fiblab/}{FibLab}\index{FibLab@\href{https://bitbucket.org/matecellab/fiblab/}{FibLab}}}
\newcommand\fiblab{\href{https://gitlab.tue.nl/STEM/fiblab/}{FibLab}\index{FibLab@\href{https://gitlab.tue.nl/STEM/fiblab/}{FibLab}}}
\newcommand\tflab{TFlab}
\newcommand\expname{\texttt{<experiment-name>.m}\index{<experiment-name>.m@\texttt{<experiment-name>.m}}}
\newcommand\paraminc{\texttt{param.inc}\index{(file)~param.inc@(file)~\texttt{param.inc}}}
......@@ -80,7 +80,7 @@
% document specific conventions
\newcommand\warning{\marginpar{\center\includegraphics[width=1cm]{Exclamation.png}\\}}
\newcommand\curver{\href{http://mategit.wfw.wtb.tue.nl/STEM/TFlab/tags}{v0.2}}
\newcommand\curver{\href{https://gitlab.tue.nl/STEM/TFlab/tags}{v0.2}}
%\newcommand\TF[1]{\texttt{TF\_#1}}
\renewcommand{\ten}[2][]{%
\hbox to 0pt{}\ap{#1}\boldsymbol{#2} }%
......@@ -91,14 +91,14 @@
%\cofeAm{0.5}{1.0}{125}{10cm}{-1cm}
%%\cofeBm{alpha}{scale}{angle}{xoff}{yoff}
\begin{center}
\Huge{\textbf{\href{http://mategit.wfw.wtb.tue.nl/STEM/TFlab}{TFlab}}}, \href{http://mategit.wfw.wtb.tue.nl/STEM/TFlab/commits/v0.2}{v0.2}\\
\Huge{\textbf{\href{https://gitlab.tue.nl/STEM/TFlab}{TFlab}}}, \href{https://gitlab.tue.nl/STEM/TFlab/tree/v0.2-RC2}{v0.2}\\
\Huge{\textbf{User manual}}\\
\mbox{}\\
\vfill
\includegraphics[width=\linewidth]{pics/megadef.png}\\
\vfill
\normalsize
\href{http://mategit.wfw.wtb.tue.nl/STEM/TFlab}{http://mategit.wfw.wtb.tue.nl/STEM/TFlab}
\href{https://gitlab.tue.nl/STEM/TFlab}{https://gitlab.tue.nl/STEM/TFlab}
\end{center}
%\cofeDm{0.7}{0.25}{-20}{4cm}{6cm}
%%\cofeCm{alpha}{scale}{angle}{xoff}{yoff}
......@@ -121,8 +121,11 @@
\def\bibname{References}
\begin{savequote}\vspace*{-0.5cm}
I have pointed out these things because the more you see how strangely Nature behaves, the harder it is to make a model that explains how even the simplest phenomena actually work. So theoretical physics has given up on that. \qauthor{Richard P.\ Feynman \cite{Feynman2006} }
%\begin{savequote}\vspace*{-0.5cm}
%I have pointed out these things because the more you see how strangely Nature behaves, the harder it is to make a model that explains how even the simplest phenomena actually work. So theoretical physics has given up on that. \qauthor{Richard P.\ Feynman \cite{Feynman2006} }
%\end{savequote}
\begin{savequote}\vspace*{-1cm}
I see that you have hitherto been one of that herd who, in order to learn how matters such as this take place, and in order to acquire a knowledge of natural effects, do not betake themselves to ships or crossbows or cannons, but retire into their studies and glance through an index and a table of contents to see whether Aristotle has said anything about them; and, being assured of the true sense of his text, consider that nothing else can be known. \qauthor{Galileo Galilei \cite{Galilei1632}}
\end{savequote}
\bibliographystyle{myplainhp}
......@@ -130,8 +133,11 @@ I have pointed out these things because the more you see how strangely Nature be
\clearpage
\begin{savequote}\vspace*{-1cm}
I see that you have hitherto been one of that herd who, in order to learn how matters such as this take place, and in order to acquire a knowledge of natural effects, do not betake themselves to ships or crossbows or cannons, but retire into their studies and glance through an index and a table of contents to see whether Aristotle has said anything about them; and, being assured of the true sense of his text, consider that nothing else can be known. \qauthor{Galileo Galilei \cite{Galilei1632}}
%\begin{savequote}\vspace*{-1cm}
%I see that you have hitherto been one of that herd who, in order to learn how matters such as this take place, and in order to acquire a knowledge of natural effects, do not betake themselves to ships or crossbows or cannons, but retire into their studies and glance through an index and a table of contents to see whether Aristotle has said anything about them; and, being assured of the true sense of his text, consider that nothing else can be known. \qauthor{Galileo Galilei \cite{Galilei1632}}
%\end{savequote}\addcontentsline{toc}{chapter}{\protect\numberline{\color{white}}Index}
\begin{savequote}\vspace*{-0.5cm}
Elsevier prides itself on only indexing high quality publications in Scopus, and if doesn't index all of the journals it publishes, isn't that admitting that not all of the journals Elsevier publishes are not high quality? \dots{} So, it is a good question to ask. And ask it I did. \qauthor{Ryan Regier \cite{Regier2016}}
\end{savequote}\addcontentsline{toc}{chapter}{\protect\numberline{\color{white}}Index}
\printindex
......
......@@ -142,9 +142,7 @@ For $\varphi \geq \frac{\piup}{2}$, the simple (and obvious, figure \ref{figcurl
\end{figure}
Now, it is easy to check whether $\frac{L}{l} \geq \frac{\piup}{2}$ (equation \ref{lfR2}) in which case it is equally easy to calculate $R = l$. Our attempts to write equation \ref{lfR1} in the form $R = f(l, L)$, however, have failed. Still, we can work this relationship out numerically (figure \ref{lfRfl}).
The combination of the projected length of a film that only curves in the $\vec{y}\vec{z}$-plane (i.e.\ not `sideways') and its radius of curvature is unique (figure \ref{lfRfl}). This allows us to calculate the radius of curvature from the \textsl{projected} film length $l$. This is not the case for the actual film \textsl{tip} position: different radii of curvature may result in the same film tip position (figure \ref{figcurllnR}, green)
The combination of the projected length of a film that only curves in the $\vec{y}\vec{z}$-plane (i.e.\ not `sideways') and its radius of curvature is unique (figure \ref{lfRfl}). This allows us to calculate the radius of curvature from the \textsl{projected} film length $l$. This is not the case for the actual film \textsl{tip} position: different radii of curvature may result in the same film tip position (figure \ref{figcurllnR}, green).
\section{Actin fibre orientations}\label{conv:actin}
......@@ -160,7 +158,7 @@ The combination of the projected length of a film that only curves in the $\vec{
\caption{Conventions for actin fibre orientations. With \textbf{(a)} actin fibre orientations $\phi$ are defined positive in the counter-clockwise direction, and zero for the positive $\vec{x}$-direction; \textbf{(b)} example with a 180-bin histogram of a simulated example (inset) and a main fibre orientation of about 30\,\degree{} (compared to about 20\,\degree{} in (a)); and \textbf{(c)} data from (b) converted for the FEM: 30 (histogram) bin counts from the raw data in (b) (grey), or 30 bin counts generated from the \fiblab-parameters that were estimated from the raw data in (b) (blue). \label{fibdef}}
\end{figure}
Please be aware that these (angle) definitions are different from what Inge \cite{Loosdregt2018} used, and that might you do well to check your preprocessing methods for compatibility with \tflab. \warning\\
Please be aware that these (angle) definitions are different from what Inge \cite{Loosdregt2018} used, and that you might do well to check your preprocessing methods for compatibility with \tflab. \warning\\
\noindent Actin fibre orientations $\phi$ are defined positive in the counter clock-wise direction with $\phi = 0$ for the positive $\vec{x}$-axis (figures \ref{fibdefdef}-\ref{fibdefhist}).
......
......@@ -61,7 +61,7 @@ figure(1)
hold on
% dummy for legend
plot(-1,-1,'r.',-1,-1,'ro',-1,-1,'b.',-1,-1,'bo',-1,-1,'g.',-1,-1,'go')
h = legend('linear, frame 1', 'linear, frame 1', 'quasi-fancy, frame 1', ...
h = legend('linear, frame 1', 'linear, frame 2', 'quasi-fancy, frame 1', ...
'quasi-fancy, frame 2', 'fancy, frame 1', 'fancy, frame 2');
set(h, 'box', 'off')
......@@ -91,7 +91,7 @@ figure(2)
hold on
% dummy for legend
plot(-1,-1,'r.-',-1,-1,'ro-',-1,-1,'b.-',-1,-1,'bo-',-1,-1,'g.-',-1,-1,'go-')
h = legend('linear, frame 1', 'linear, frame 1', 'quasi-fancy, frame 1', ...
h = legend('linear, frame 1', 'linear, frame 2', 'quasi-fancy, frame 1', ...
'quasi-fancy, frame 2', 'fancy, frame 1', 'fancy, frame 2');
set(h, 'box', 'off')
......
% written by TF_writeparam
% http://mategit.wfw.wtb.tue.nl/STEM/TFlab
% https://gitlab.tue.nl/STEM/TFlab
% @ 06-May-2018 15:16:16
param.expname = 'estlinfancy_fancy';
param.nfilm = 8;
......@@ -20,7 +20,7 @@ param.simfailtol = 5;
param.fancyest = 1.000000e+00;
param.instpath = '/home/mark/git/mylab/matlab/TFlab/';
param.intvars = {'refframe', 'nfilm', 'nframe', 'stack', 'curlcheck', 'simfailtol', 'maxinc'};
param.TFlabUrl = 'http://mategit.wfw.wtb.tue.nl/STEM/TFlab';
param.TFlabUrl = 'https://gitlab.tue.nl/STEM/TFlab';
param.TFlabBranch = 'testing';
param.TFlabVersion = '0.1+';
param.imfiles = {'exp4_wt_0.tif'};
......
% written by TF_writeparam
% http://mategit.wfw.wtb.tue.nl/STEM/TFlab
% https://gitlab.tue.nl/STEM/TFlab
% @ 06-May-2018 13:55:28
param.expname = 'estlinfancy_lin';
param.nfilm = 8;
......@@ -20,7 +20,7 @@ param.simfailtol = 5;
param.fancyest = 0.000000e+00;
param.instpath = '/home/mark/git/mylab/matlab/TFlab/';
param.intvars = {'refframe', 'nfilm', 'nframe', 'stack', 'curlcheck', 'simfailtol', 'maxinc'};
param.TFlabUrl = 'http://mategit.wfw.wtb.tue.nl/STEM/TFlab';
param.TFlabUrl = 'https://gitlab.tue.nl/STEM/TFlab';
param.TFlabBranch = 'testing';
param.TFlabVersion = '0.1+';
param.imfiles = {'exp4_wt_0.tif'};
......
% written by TF_writeparam
% http://mategit.wfw.wtb.tue.nl/STEM/TFlab
% https://gitlab.tue.nl/STEM/TFlab
% @ 06-May-2018 14:45:37
param.expname = 'estlinfancy_linfancy';
param.nfilm = 8;
......@@ -20,7 +20,7 @@ param.simfailtol = 5;
param.fancyest = 5.000000e-01;
param.instpath = '/home/mark/git/mylab/matlab/TFlab/';
param.intvars = {'refframe', 'nfilm', 'nframe', 'stack', 'curlcheck', 'simfailtol', 'maxinc'};
param.TFlabUrl = 'http://mategit.wfw.wtb.tue.nl/STEM/TFlab';
param.TFlabUrl = 'https://gitlab.tue.nl/STEM/TFlab';
param.TFlabBranch = 'testing';
param.TFlabVersion = '0.1+';
param.imfiles = {'exp4_wt_0.tif'};
......
......@@ -152,7 +152,7 @@ fancy & 7 & 2 & 9 & 31\,m\\ \noalign{\smallskip}\hline
\noindent In the example that we choose to show you, fancy estimation \textsl{rocks}, big time. Of course.
But in all honesty, we had to actively look for this impressive example. If we had for instance chosen to fit frame 2 \textsl{before} frame 1, the benefit of fancy estimation had been much less impressive. Likewise if the target length for frame 2 had been (much) closer to that of frame 1. Furthermore, the old adage that 'life is like a sewer -- what you get out of it depends on what you put into it.'\footnote{bagger in = bagger uit} \cite{Lehrer1960}, also holds for the estimation of the parameters of our analytical function. The quality of the fit, and therefore of the new estimate for $\sigma_x$ depends on the quality of the input values (estimates so far).
But in all honesty, we had to actively look for this impressive example. If we had for instance chosen to fit frame 2 \textsl{before} frame 1, the benefit of fancy estimation had been much less impressive. Likewise if the target length for frame 2 had been (much) closer to that of frame 1. Furthermore, the old adage that `life is like a sewer -- what you get out of it depends on what you put into it.'\footnote{bagger in = bagger uit} \cite{Lehrer1960}, also holds for the estimation of the parameters of our analytical function. The quality of the fit, and therefore of the new estimate for $\sigma_x$ depends on the quality of the input values (estimates so far).
In general, the quality of the fit will improve with more input estimates, and for input estimates that are equally spaced (no clustering of points). But it is impossible to predict beforehand how the fits are going to behave during the estimation process. And when the analytical fit is off, linear interpolation may actually be better than the `fancy' estimation.
......
% written by TF_writeparam
% http://mategit.wfw.wtb.tue.nl/STEM/TFlab
% https://gitlab.tue.nl/STEM/TFlab
% @ 06-May-2018 15:17:51
param.expname = 'exp4_wt_0';
param.nfilm = 8;
......@@ -24,7 +24,7 @@ param.simfailtol = 5;
param.fancyest = 5.000000e-01;
param.instpath = '/home/mark/git/TFlab/';
param.intvars = {'refframe', 'nfilm', 'nframe', 'stack', 'curlcheck', 'simfailtol', 'maxinc', 'nelx', 'nely', 'nelz', 'nCPU', 'submit'};
param.TFlabUrl = 'http://mategit.wfw.wtb.tue.nl/STEM/TFlab';
param.TFlabUrl = 'https://gitlab.tue.nl/STEM/TFlab';
param.TFlabBranch = 'testing';
param.TFlabVersion = '0.1+';
param.imfiles = {'exp4_wt_0.tif'};
......
% written by TF_writeparam
% http://mategit.wfw.wtb.tue.nl/STEM/TFlab
% https://gitlab.tue.nl/STEM/TFlab
% @ 15-May-2018 12:49:44
param.expname = 'imanatip_param';
param.nfilm = 8;
......@@ -20,7 +20,7 @@ param.simfailtol = 5.000000e+00;
param.fancyest = 5.000000e-01;
param.instpath = '/home/mark/git/mylab/matlab/TFlab/';
param.intvars = {'refframe', 'nfilm', 'nframe', 'stack'};
param.TFlabUrl = 'http://mategit.wfw.wtb.tue.nl/STEM/TFlab';
param.TFlabUrl = 'https://gitlab.tue.nl/STEM/TFlab';
param.TFlabBranch = 'testing';
param.TFlabVersion = '0.1+';
param.imfiles = {'exp4_wt_0.tif'};
......
% written by TF_writeparam
% http://mategit.wfw.wtb.tue.nl/STEM/TFlab
% https://gitlab.tue.nl/STEM/TFlab
% @ 16-Nov-2018 15:46:50
param.expname = 'isokappa_param';
param.nfilm = 1;
......@@ -29,7 +29,7 @@ param.simfailtol = 5;
param.fancyest = 5.000000e-01;
param.instpath = '/home/mark/git/TFlab/';
param.intvars = {'refframe', 'nfilm', 'nframe', 'stack', 'curlcheck', 'simfailtol', 'maxinc', 'nelx', 'nely', 'nelz', 'nCPU', 'submit'};
param.TFlabUrl = 'http://mategit.wfw.wtb.tue.nl/STEM/TFlab';
param.TFlabUrl = 'https://gitlab.tue.nl/STEM/TFlab';
param.TFlabBranch = 'testing';
param.TFlabVersion = '0.1+';
param.length = [0.000000e+00, 0.000000e+00, 4.000000e+00];
......
% written by TF_writeparam
% http://mategit.wfw.wtb.tue.nl/STEM/TFlab
% https://gitlab.tue.nl/STEM/TFlab
% @ 29-Apr-2018 15:29:39
param.expname = 'lRsigma_param';
param.nfilm = 1;
......@@ -20,7 +20,7 @@ param.simfailtol = 5;
param.fancyest = 5.000000e-01;
param.instpath = '/home/mark/git/TFlab/';
param.intvars = {'refframe', 'nfilm', 'nframe', 'stack', 'curlcheck', 'simfailtol', 'maxinc'};
param.TFlabUrl = 'http://mategit.wfw.wtb.tue.nl/STEM/TFlab';
param.TFlabUrl = 'https://gitlab.tue.nl/STEM/TFlab';
param.TFlabBranch = 'testing';
param.TFlabVersion = '0.1+';
param.length = [0.000000e+00, 0.000000e+00, 4.000000e+00];
......
% written by TF_writeparam
% http://mategit.wfw.wtb.tue.nl/STEM/TFlab
% https://gitlab.tue.nl/STEM/TFlab
% @ 17-Nov-2018 11:50:33
param.expname = 'lfmu_01_param';
param.nfilm = 1;
......@@ -29,7 +29,7 @@ param.simfailtol = 5;
param.fancyest = 5.000000e-01;
param.instpath = '/home/mark/git/TFlab/';
param.intvars = {'refframe', 'nfilm', 'nframe', 'stack', 'curlcheck', 'simfailtol', 'maxinc', 'nelx', 'nely', 'nelz', 'nCPU', 'submit'};
param.TFlabUrl = 'http://mategit.wfw.wtb.tue.nl/STEM/TFlab';
param.TFlabUrl = 'https://gitlab.tue.nl/STEM/TFlab';
param.TFlabBranch = 'testing';
param.TFlabVersion = '0.1+';
param.length = [0.000000e+00, 0.000000e+00, 4.000000e+00];
......
% written by TF_writeparam
% http://mategit.wfw.wtb.tue.nl/STEM/TFlab
% https://gitlab.tue.nl/STEM/TFlab
% @ 17-Nov-2018 11:57:09
param.expname = 'lfmu_02_param';
param.nfilm = 1;
......@@ -29,7 +29,7 @@ param.simfailtol = 5;
param.fancyest = 5.000000e-01;
param.instpath = '/home/mark/git/TFlab/';
param.intvars = {'refframe', 'nfilm', 'nframe', 'stack', 'curlcheck', 'simfailtol', 'maxinc', 'nelx', 'nely', 'nelz', 'nCPU', 'submit'};
param.TFlabUrl = 'http://mategit.wfw.wtb.tue.nl/STEM/TFlab';
param.TFlabUrl = 'https://gitlab.tue.nl/STEM/TFlab';
param.TFlabBranch = 'testing';
param.TFlabVersion = '0.1+';
param.length = [0.000000e+00, 0.000000e+00, 4.000000e+00];
......
% written by TF_writeparam
% http://mategit.wfw.wtb.tue.nl/STEM/TFlab
% https://gitlab.tue.nl/STEM/TFlab
% @ 17-Nov-2018 12:05:33
param.expname = 'lfmu_03_param';
param.nfilm = 1;
......@@ -29,7 +29,7 @@ param.simfailtol = 5;
param.fancyest = 5.000000e-01;
param.instpath = '/home/mark/git/TFlab/';
param.intvars = {'refframe', 'nfilm', 'nframe', 'stack', 'curlcheck', 'simfailtol', 'maxinc', 'nelx', 'nely', 'nelz', 'nCPU', 'submit'};
param.TFlabUrl = 'http://mategit.wfw.wtb.tue.nl/STEM/TFlab';
param.TFlabUrl = 'https://gitlab.tue.nl/STEM/TFlab';
param.TFlabBranch = 'testing';
param.TFlabVersion = '0.1+';
param.length = [0.000000e+00, 0.000000e+00, 4.000000e+00];
......
% written by TF_writeparam
% http://mategit.wfw.wtb.tue.nl/STEM/TFlab
% https://gitlab.tue.nl/STEM/TFlab
% @ 17-Nov-2018 12:15:08
param.expname = 'lfmu_04_param';
param.nfilm = 1;
......@@ -29,7 +29,7 @@ param.simfailtol = 5;
param.fancyest = 5.000000e-01;
param.instpath = '/home/mark/git/TFlab/';
param.intvars = {'refframe', 'nfilm', 'nframe', 'stack', 'curlcheck', 'simfailtol', 'maxinc', 'nelx', 'nely', 'nelz', 'nCPU', 'submit'};
param.TFlabUrl = 'http://mategit.wfw.wtb.tue.nl/STEM/TFlab';
param.TFlabUrl = 'https://gitlab.tue.nl/STEM/TFlab';
param.TFlabBranch = 'testing';
param.TFlabVersion = '0.1+';
param.length = [0.000000e+00, 0.000000e+00, 4.000000e+00];
......
% written by TF_writeparam
% http://mategit.wfw.wtb.tue.nl/STEM/TFlab
% https://gitlab.tue.nl/STEM/TFlab
% @ 17-Nov-2018 12:25:56
param.expname = 'lfmu_05_param';
param.nfilm = 1;
......@@ -29,7 +29,7 @@ param.simfailtol = 5;
param.fancyest = 5.000000e-01;
param.instpath = '/home/mark/git/TFlab/';
param.intvars = {'refframe', 'nfilm', 'nframe', 'stack', 'curlcheck', 'simfailtol', 'maxinc', 'nelx', 'nely', 'nelz', 'nCPU', 'submit'};
param.TFlabUrl = 'http://mategit.wfw.wtb.tue.nl/STEM/TFlab';
param.TFlabUrl = 'https://gitlab.tue.nl/STEM/TFlab';
param.TFlabBranch = 'testing';
param.TFlabVersion = '0.1+';
param.length = [0.000000e+00, 0.000000e+00, 4.000000e+00];
......
% written by TF_writeparam
% http://mategit.wfw.wtb.tue.nl/STEM/TFlab
% https://gitlab.tue.nl/STEM/TFlab
% @ 17-Nov-2018 12:35:08
param.expname = 'lfmu_06_param';
param.nfilm = 1;
......@@ -29,7 +29,7 @@ param.simfailtol = 5;
param.fancyest = 5.000000e-01;
param.instpath = '/home/mark/git/TFlab/';
param.intvars = {'refframe', 'nfilm', 'nframe', 'stack', 'curlcheck', 'simfailtol', 'maxinc', 'nelx', 'nely', 'nelz', 'nCPU', 'submit'};
param.TFlabUrl = 'http://mategit.wfw.wtb.tue.nl/STEM/TFlab';
param.TFlabUrl = 'https://gitlab.tue.nl/STEM/TFlab';
param.TFlabBranch = 'testing';
param.TFlabVersion = '0.1+';
param.length = [0.000000e+00, 0.000000e+00, 4.000000e+00];
......
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